Functional Analysis of a Pomegranate (Punica granatum L.) MYB Transcription Factor Involved in the Regulation of Anthocyanin Biosynthesis.
Identifieur interne : 001D57 ( Main/Exploration ); précédent : 001D56; suivant : 001D58Functional Analysis of a Pomegranate (Punica granatum L.) MYB Transcription Factor Involved in the Regulation of Anthocyanin Biosynthesis.
Auteurs : Ghazale Khaksar [Iran] ; Badraldin Ebrahim Sayed Tabatabaei [Iran, Pays-Bas] ; Ahmad Arzani [Iran] ; Cyrus Ghobadi [Iran] ; Esmaeil Ebrahimie [Iran, Australie]Source :
- Iranian journal of biotechnology [ 1728-3043 ] ; 2015.
Abstract
BACKGROUND
Pomegranate fruit (
OBJECTIVES
The present study was conducted to elucidate the relationship between the expression of MYB transcription factor and the anthocyanin accumulation during the colour development phase of pomegranate fruits.
MATERIALS AND METHODS
In this work, R2R3-MYB transcription factor (PgMYB) was isolated and characterized from pomegranate skin through RACE-PCR. The expression of
RESULTS
The results indicated a strong association between skin colour in mature pomegranate fruits with the
CONCLUSIONS
It is speculated that
DOI: 10.15171/ijb.1045
PubMed: 28959277
PubMed Central: PMC5434983
Affiliations:
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MYB Transcription Factor Involved in the Regulation of Anthocyanin Biosynthesis.</title><author><name sortKey="Khaksar, Ghazale" sort="Khaksar, Ghazale" uniqKey="Khaksar G" first="Ghazale" last="Khaksar">Ghazale Khaksar</name><affiliation wicri:level="1"><nlm:affiliation>Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</nlm:affiliation><country xml:lang="fr">Iran</country><wicri:regionArea>Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan</wicri:regionArea><wicri:noRegion>Isfahan</wicri:noRegion></affiliation></author><author><name sortKey="Sayed Tabatabaei, Badraldin Ebrahim" sort="Sayed Tabatabaei, Badraldin Ebrahim" uniqKey="Sayed Tabatabaei B" first="Badraldin Ebrahim" last="Sayed Tabatabaei">Badraldin Ebrahim Sayed Tabatabaei</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biotechnology, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</nlm:affiliation><country xml:lang="fr">Iran</country><wicri:regionArea>Department of Biotechnology, College of Agriculture, Isfahan University of Technology, Isfahan</wicri:regionArea><wicri:noRegion>Isfahan</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:affiliation>Department of Molecular Plant Physiology, Utrecht University, Padualaan 8, 3584CH, Utrecht , The Netherlands.</nlm:affiliation><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Molecular Plant Physiology, Utrecht University, Padualaan 8, 3584CH, Utrecht </wicri:regionArea><orgName type="university">Université d'Utrecht</orgName><placeName><settlement type="city">Utrecht</settlement><region nuts="2">Utrecht (province)</region></placeName></affiliation></author><author><name sortKey="Arzani, Ahmad" sort="Arzani, Ahmad" uniqKey="Arzani A" first="Ahmad" last="Arzani">Ahmad Arzani</name><affiliation wicri:level="1"><nlm:affiliation>Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</nlm:affiliation><country xml:lang="fr">Iran</country><wicri:regionArea>Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan</wicri:regionArea><wicri:noRegion>Isfahan</wicri:noRegion></affiliation></author><author><name sortKey="Ghobadi, Cyrus" sort="Ghobadi, Cyrus" uniqKey="Ghobadi C" first="Cyrus" last="Ghobadi">Cyrus Ghobadi</name><affiliation wicri:level="1"><nlm:affiliation>Department of Horticulture, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</nlm:affiliation><country xml:lang="fr">Iran</country><wicri:regionArea>Department of Horticulture, College of Agriculture, Isfahan University of Technology, Isfahan</wicri:regionArea><wicri:noRegion>Isfahan</wicri:noRegion></affiliation></author><author><name sortKey="Ebrahimie, Esmaeil" sort="Ebrahimie, Esmaeil" uniqKey="Ebrahimie E" first="Esmaeil" last="Ebrahimie">Esmaeil Ebrahimie</name><affiliation wicri:level="1"><nlm:affiliation>Department of Crop Production and Plant Breeding, College of Agriculture, Shiraz University, Shiraz, 73761, Iran.</nlm:affiliation><country xml:lang="fr">Iran</country><wicri:regionArea>Department of Crop Production and Plant Breeding, College of Agriculture, Shiraz University, Shiraz, 73761</wicri:regionArea><wicri:noRegion>73761</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Discipline of Genetics, School of Biological Science, University of Adelaide, Adelaide, 5001, SA, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Discipline of Genetics, School of Biological Science, University of Adelaide, Adelaide, 5001, SA</wicri:regionArea><wicri:noRegion>SA</wicri:noRegion></affiliation></author></analytic><series><title level="j">Iranian journal of biotechnology</title><idno type="ISSN">1728-3043</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b></p><p>Pomegranate fruit (</p></div><div type="abstract" xml:lang="en"><p><b>OBJECTIVES</b></p><p>The present study was conducted to elucidate the relationship between the expression of MYB transcription factor and the anthocyanin accumulation during the colour development phase of pomegranate fruits.</p></div><div type="abstract" xml:lang="en"><p><b>MATERIALS AND METHODS</b></p><p>In this work, R2R3-MYB transcription factor (PgMYB) was isolated and characterized from pomegranate skin through RACE-PCR. The expression of </p></div><div type="abstract" xml:lang="en"><p><b>RESULTS</b></p><p>The results indicated a strong association between skin colour in mature pomegranate fruits with the </p></div><div type="abstract" xml:lang="en"><p><b>CONCLUSIONS</b></p><p>It is speculated that </p></div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">28959277</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">1728-3043</ISSN><JournalIssue CitedMedium="Print"><Volume>13</Volume><Issue>1</Issue><PubDate><Year>2015</Year><Month>Mar</Month></PubDate></JournalIssue><Title>Iranian journal of biotechnology</Title><ISOAbbreviation>Iran J Biotechnol</ISOAbbreviation></Journal><ArticleTitle>Functional Analysis of a Pomegranate (<i>Punica granatum</i> L.) MYB Transcription Factor Involved in the Regulation of Anthocyanin Biosynthesis.</ArticleTitle><Pagination><MedlinePgn>17-25</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.15171/ijb.1045</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Pomegranate fruit (<i>Punica granatum</i> L.) is a rich source of anthocyanin pigments resulting in vibrant colours and anti-oxidant contents. Although the intensity and pattern of anthocyanin biosynthesis in fruit are strongly influenced by R2R3-MYB transcription factors, little is known about the regulation and role of MYB in anthocyanin pathway of pomegranate.</AbstractText><AbstractText Label="OBJECTIVES" NlmCategory="OBJECTIVE">The present study was conducted to elucidate the relationship between the expression of MYB transcription factor and the anthocyanin accumulation during the colour development phase of pomegranate fruits.</AbstractText><AbstractText Label="MATERIALS AND METHODS" NlmCategory="METHODS">In this work, R2R3-MYB transcription factor (PgMYB) was isolated and characterized from pomegranate skin through RACE-PCR. The expression of <i>PgMYB</i> gene was monitored in three distinct pomegranate accessions with distinctive skin colour and pattern by semi-quantitative RT-PCR.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">The results indicated a strong association between skin colour in mature pomegranate fruits with the <i>PgMYB</i> transcripts. The highest expression level of <i>PgMYB</i> gene was observed in Poost Siyah Yazd (dark purple skin) throughout the ripening process. Furthermore, comparison of PgMYB amino acid sequences with those of R2R3-MYB family in grapevine, eucalyptus, peach, cacao, populus and Arabidopsis demonstrated that this protein shares high similarity (75-85% amino acid identity) with their conserved MYB domain. Computational structure prediction of PgMYB showed that the three conserved amino acids (Asn, Lys and Lys) are present in the same position of the MYB domain.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">It is speculated that <i>PgMYB</i> gene influences the fruit colour and could be used to improve the accumula-tion of anthocyanin pigments in the pomegranate fruit.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Khaksar</LastName><ForeName>Ghazale</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sayed Tabatabaei</LastName><ForeName>Badraldin Ebrahim</ForeName><Initials>BE</Initials><AffiliationInfo><Affiliation>Department of Biotechnology, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Molecular Plant Physiology, Utrecht University, Padualaan 8, 3584CH, Utrecht , The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Arzani</LastName><ForeName>Ahmad</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ghobadi</LastName><ForeName>Cyrus</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Department of Horticulture, College of Agriculture, Isfahan University of Technology, Isfahan, Iran.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ebrahimie</LastName><ForeName>Esmaeil</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Department of Crop Production and Plant Breeding, College of Agriculture, Shiraz University, Shiraz, 73761, Iran.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Discipline of Genetics, School of Biological Science, University of Adelaide, Adelaide, 5001, SA, Australia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Iran</Country><MedlineTA>Iran J Biotechnol</MedlineTA><NlmUniqueID>101276796</NlmUniqueID><ISSNLinking>1728-3043</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Anthocyanin biosynthesis</Keyword><Keyword MajorTopicYN="N">MYB transcription factor</Keyword><Keyword MajorTopicYN="N">Pomegranate</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>9</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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